FastQCFastQC Report
Sun 19 Mar 2023
SRR4895811_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895811_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2879441
Sequences flagged as poor quality0
Sequence length151
%GC32

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCTAG973050.0143.543723
TGTTCTA2896200.0143.381522
GTTCTAA844550.0142.58733
GTGTTCT2921450.0142.142271
GTTCTAT1049250.0141.943313
TTCTAGA277500.0140.762054
TTCTAGG357400.0139.517074
TCTAGAG91100.0139.38975
TTCTAAG298950.0139.032124
TCTAGAT97650.0138.75365
TCTATAG109850.0138.572775
TTCTAGT359700.0137.7834
TCTAGGT125000.0137.641745
TTCTATG380450.0137.318954
CTAGATG32500.0136.896246
TCTATGG136850.0136.893895
TCTAAGT102650.0136.842095
TCTAGGA95050.0136.783395
TCTAGTG124050.0136.545045
TCTAGTA104850.0136.446675
Produced by FastQC (version 0.11.5)