Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895809_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1110384 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 33 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTCGTAGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTC | 1417 | 0.12761351028112797 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCGTAG | 111090 | 0.0 | 144.14664 | 1 |
TCGTAGA | 111110 | 0.0 | 144.12068 | 2 |
CGTAGAG | 36340 | 0.0 | 143.8807 | 3 |
CGTAGAT | 40545 | 0.0 | 143.7912 | 3 |
CGTAGAA | 32990 | 0.0 | 143.60602 | 3 |
GTAGATG | 14015 | 0.0 | 141.49112 | 4 |
GTAGAGT | 12555 | 0.0 | 141.28888 | 4 |
GTAGAGA | 11055 | 0.0 | 140.56529 | 4 |
GTAGAGG | 13125 | 0.0 | 140.53705 | 4 |
GTAGATA | 12725 | 0.0 | 140.42134 | 4 |
GTAGAAT | 12415 | 0.0 | 139.7457 | 4 |
GTAGAAG | 11255 | 0.0 | 139.54103 | 4 |
GTAGATT | 14505 | 0.0 | 138.45131 | 4 |
CGTAGAC | 1570 | 0.0 | 138.24724 | 3 |
TAGATGA | 3820 | 0.0 | 136.47859 | 5 |
TAGATAG | 4240 | 0.0 | 135.88467 | 5 |
TAGAGTG | 4200 | 0.0 | 135.46194 | 5 |
TAGATGG | 4985 | 0.0 | 135.39427 | 5 |
TAGATTG | 4950 | 0.0 | 135.33188 | 5 |
TAGAGTA | 3885 | 0.0 | 135.12321 | 5 |