FastQCFastQC Report
Sun 19 Mar 2023
SRR4895802_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895802_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences388705
Sequences flagged as poor quality0
Sequence length151
%GC32

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCACAT389150.0143.983171
CACATAG137250.0143.729753
CCACATA390400.0143.522162
ACATAGG52800.0143.057824
CACATAT128950.0142.808413
ACATAGT45350.0142.560564
CACATAA118450.0142.506973
ACATAGA38500.0142.464984
CATAGGG19500.0142.301795
ACATATG46900.0142.152054
ACATAAG41200.0141.875664
CATAAGC2700.0141.480415
CATAGTA14900.0141.247515
CATATGA13600.0140.97015
CATAGAG15400.0140.40575
CATATTG15350.0140.393515
CATAGTG14750.0140.24075
CATAATG15350.0139.923975
CATATGG16900.0139.885075
CATAGGA15100.0139.8545
Produced by FastQC (version 0.11.5)