FastQCFastQC Report
Sun 19 Mar 2023
SRR4895792_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895792_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences378421
Sequences flagged as poor quality0
Sequence length151
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATATG750.0144.226758
CGACACA380100.0143.581681
GACACAC380350.0143.48732
CACACTG46300.0141.11174
ACACACT137900.0140.879933
ACACACG110700.0140.839313
ACACGAT13600.0140.515035
CACACGT34700.0139.654714
ACACTGA12300.0139.536445
CACACTT51400.0139.31634
CACTTGA4400.0139.309926
ACACTTG16950.0139.121385
ACACTGT16550.0138.997975
CACACGG41400.0138.478584
CACACTA40100.0137.752734
ACACAGT13650.0137.35885
ACACTAG13600.0137.333565
CACACGA34100.0137.248034
CACACAG39950.0137.006384
ACACGGT13500.0136.748325
Produced by FastQC (version 0.11.5)