FastQCFastQC Report
Sun 19 Mar 2023
SRR4895772_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895772_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1213879
Sequences flagged as poor quality0
Sequence length151
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGACAC1217100.0143.812382
GGACACT434300.0143.533393
AAGGACA1221400.0143.306081
GGACACG391950.0143.185713
GACACTG142250.0143.082374
GACACGT145500.0142.909074
GACACAT123450.0142.795754
GACACTT164200.0142.660614
GACACTA126550.0142.374314
GGACACA362450.0142.208243
GACACGA113550.0141.530644
ACACGTA45750.0140.730385
GACACGG132950.0139.967484
ACACTTG56300.0139.587225
ACACGAT42000.0139.562525
GACACAG125000.0139.467764
ACACTGT52400.0139.106495
ACACTAG43150.0138.68355
ACACGTG44350.0138.670155
ACACGTT49250.0138.634495
Produced by FastQC (version 0.11.5)