FastQCFastQC Report
Sun 19 Mar 2023
SRR4895770_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895770_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences495599
Sequences flagged as poor quality0
Sequence length151
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG168133.3924604367644005No Hit
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCG23920.48264827007318417No Hit
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT19600.39548102397301044No Hit
AACTCACCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC17100.3450370158131877No Hit
AACTCACCATGTACTCTGCGTTGATACCACTGCTCCCCATGTACTCTGCG14500.292575247326972No Hit
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACGCTGCG7360.1485071600225182No Hit
AACTCACCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGC6950.14023434268430726No Hit
AACTCACCATGTACTCTGCGGTGATACCACTGCTTCCCATGTACTCTGCG5830.11763542702870668No Hit
AACTCACCATGTACTCTGCGTGGATACCACTGCTTCCCATGTACTCTGCG5800.11703009893078879No Hit
AACTCACCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACT5040.10169512045020268No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGTCTA151.2563933E-4144.218448
AACTCAC496500.0143.94251
ACTCACC497250.0143.725392
CTCACCG151650.0143.362563
TCACCAT91800.0142.804554
CTCACCA176050.0142.498153
TCACCGT52700.0142.439674
TCACCGA44250.0142.262944
CTCACCT151050.0141.926993
CACCATG57800.0141.848075
TCACCAG44250.0141.774064
TCACCTA45950.0141.236774
TCACCTG50200.0141.201924
TCACCGG53500.0140.983644
ACCATGT48600.0140.954246
CACCGAT17000.0140.825065
CACCTAG14250.0139.664175
CACCGTA14800.0139.346195
CCAGTAG1450.0139.245397
ACCGTGA4150.0139.005746