Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895770_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 495599 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 16813 | 3.3924604367644005 | No Hit |
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCG | 2392 | 0.48264827007318417 | No Hit |
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT | 1960 | 0.39548102397301044 | No Hit |
AACTCACCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC | 1710 | 0.3450370158131877 | No Hit |
AACTCACCATGTACTCTGCGTTGATACCACTGCTCCCCATGTACTCTGCG | 1450 | 0.292575247326972 | No Hit |
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACGCTGCG | 736 | 0.1485071600225182 | No Hit |
AACTCACCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGC | 695 | 0.14023434268430726 | No Hit |
AACTCACCATGTACTCTGCGGTGATACCACTGCTTCCCATGTACTCTGCG | 583 | 0.11763542702870668 | No Hit |
AACTCACCATGTACTCTGCGTGGATACCACTGCTTCCCATGTACTCTGCG | 580 | 0.11703009893078879 | No Hit |
AACTCACCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACT | 504 | 0.10169512045020268 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGGTCTA | 15 | 1.2563933E-4 | 144.21844 | 8 |
AACTCAC | 49650 | 0.0 | 143.9425 | 1 |
ACTCACC | 49725 | 0.0 | 143.72539 | 2 |
CTCACCG | 15165 | 0.0 | 143.36256 | 3 |
TCACCAT | 9180 | 0.0 | 142.80455 | 4 |
CTCACCA | 17605 | 0.0 | 142.49815 | 3 |
TCACCGT | 5270 | 0.0 | 142.43967 | 4 |
TCACCGA | 4425 | 0.0 | 142.26294 | 4 |
CTCACCT | 15105 | 0.0 | 141.92699 | 3 |
CACCATG | 5780 | 0.0 | 141.84807 | 5 |
TCACCAG | 4425 | 0.0 | 141.77406 | 4 |
TCACCTA | 4595 | 0.0 | 141.23677 | 4 |
TCACCTG | 5020 | 0.0 | 141.20192 | 4 |
TCACCGG | 5350 | 0.0 | 140.98364 | 4 |
ACCATGT | 4860 | 0.0 | 140.95424 | 6 |
CACCGAT | 1700 | 0.0 | 140.82506 | 5 |
CACCTAG | 1425 | 0.0 | 139.66417 | 5 |
CACCGTA | 1480 | 0.0 | 139.34619 | 5 |
CCAGTAG | 145 | 0.0 | 139.24539 | 7 |
ACCGTGA | 415 | 0.0 | 139.00574 | 6 |