FastQCFastQC Report
Sun 19 Mar 2023
SRR4895768_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895768_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1545677
Sequences flagged as poor quality0
Sequence length151
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTA1555850.0143.248262
GTGGTAG518400.0142.190893
GTGGTAA457200.0141.938573
GTGGTAT572650.0141.713353
TGGTGGT1574800.0141.524521
TGGTATG208800.0140.42994
TGGTAGT192350.0139.283424
TGGTAAG157200.0138.644154
TGGTATA167350.0138.162174
TGGTAGA146150.0138.027244
TGGTAAT169150.0138.013244
TGGTAGG187050.0137.101464
GGTATGA54700.0135.63075
GGTAGTA58000.0134.875085
GGTATAG56750.0134.034485
GGTAATG58600.0132.878945
TGGTATT211750.0130.778644
GGTATGG74050.0130.469715
GGTATTG76500.0130.249665
GGTATGC18000.0130.178965
Produced by FastQC (version 0.11.5)