Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895764_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1501859 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 33 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TCTTCACATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 5284 | 0.3518306312376861 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTTCACA | 150785 | 0.0 | 143.6226 | 2 |
TCTTCAC | 151015 | 0.0 | 143.40387 | 1 |
TTCACAG | 52235 | 0.0 | 143.20259 | 3 |
TCACAGT | 18960 | 0.0 | 142.86546 | 4 |
TCACATG | 19695 | 0.0 | 142.62227 | 4 |
TCACAGG | 18910 | 0.0 | 141.90877 | 4 |
TTCACAT | 53690 | 0.0 | 141.80609 | 3 |
TCACAAG | 14870 | 0.0 | 141.52968 | 4 |
TCACAGA | 14305 | 0.0 | 141.12195 | 4 |
TCACATA | 15545 | 0.0 | 140.25406 | 4 |
TTCACAA | 44285 | 0.0 | 140.07742 | 3 |
TCACAAT | 16265 | 0.0 | 139.9853 | 4 |
CACATAG | 5475 | 0.0 | 139.58737 | 5 |
CACATGT | 7675 | 0.0 | 139.31155 | 5 |
CACAGTG | 6470 | 0.0 | 139.29327 | 5 |
CACAGTA | 5655 | 0.0 | 139.2241 | 5 |
CACAGTT | 6440 | 0.0 | 138.59871 | 5 |
CACATGG | 6425 | 0.0 | 138.13678 | 5 |
TCACATT | 18505 | 0.0 | 138.07944 | 4 |
CACATGA | 5290 | 0.0 | 138.06328 | 5 |