FastQCFastQC Report
Sun 19 Mar 2023
SRR4895755_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895755_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1016614
Sequences flagged as poor quality0
Sequence length151
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGCGAA1018100.0143.997632
TGCGAAT363800.0143.972273
GGTGCGA1018750.0143.905781
TGCGAAG346200.0143.564453
TGCGAAA293050.0143.17673
GCGAATA111250.0143.043464
GCGAATG125250.0143.001174
GCGAAGT123800.0142.870534
GCGAATT125550.0142.774324
GCGAAAT107450.0142.73384
CGAATAG38000.0142.31265
CGAAGAT36550.0141.645515
CGAAGTA36800.0141.466985
CGAATAT37600.0140.950045
GCGAAGA98750.0140.924324
CGAATGA32800.0140.69285
CGAAGGT40700.0140.666875
CGAATGG44000.0140.604865
GCGAAGG125250.0140.468144
CGAATTA36450.0140.253745
Produced by FastQC (version 0.11.5)