Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895754_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 234787 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 37 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGAGAACACACCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 257 | 0.10946091563842973 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGTCAGC | 10 | 0.0072014984 | 144.22769 | 8 |
CAATTCG | 20 | 2.1844735E-6 | 144.22769 | 7 |
CATTCGG | 20 | 2.1844735E-6 | 144.22769 | 7 |
CATGCTG | 15 | 1.2552374E-4 | 144.22768 | 7 |
GAGAACA | 23550 | 0.0 | 143.76837 | 2 |
AGAACAT | 8255 | 0.0 | 143.52882 | 3 |
GGAGAAC | 23605 | 0.0 | 143.4334 | 1 |
GAACAGT | 3030 | 0.0 | 142.7997 | 4 |
GAACATT | 3025 | 0.0 | 142.79733 | 4 |
AGAACAG | 8135 | 0.0 | 142.63205 | 3 |
GAACATG | 2785 | 0.0 | 142.15619 | 4 |
GAACATA | 2450 | 0.0 | 141.57861 | 4 |
GAACAAT | 2550 | 0.0 | 139.9857 | 4 |
AACAGTG | 1120 | 0.0 | 139.72058 | 5 |
AGAACAA | 6835 | 0.0 | 139.05786 | 3 |
GAACAGG | 2870 | 0.0 | 138.95107 | 4 |
GAACAGA | 2260 | 0.0 | 138.48412 | 4 |
CAGATGG | 125 | 0.0 | 138.45857 | 7 |
AACATGT | 960 | 0.0 | 137.46701 | 5 |
AACATTG | 1145 | 0.0 | 137.29973 | 5 |