FastQCFastQC Report
Sun 19 Mar 2023
SRR4895747_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895747_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences434156
Sequences flagged as poor quality0
Sequence length151
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCTGA434450.0144.109561
AGCTGAA435100.0143.894272
GCTGAAG144500.0143.560463
GCTGAAT155350.0143.42013
GCTGAAA130350.0142.992193
CTGAATA47450.0142.689564
CTGAAGT52050.0142.54684
CTGAATG55200.0142.511024
CTGAAGG50850.0141.940374
CTGAAAG48100.0141.660754
CTGAATT52200.0141.446524
CTGAAAT48250.0141.36984
CTGAAGA41450.0141.077944
TGAATAG18550.0136.823765
TGAAGTG18300.0135.146825
TGAATTG21250.0133.351045
CTGAAAA36750.0132.829384
TGAAATG19550.0132.038045
TGAATGA17000.0131.908955
TGAATGG20050.0130.543435
Produced by FastQC (version 0.11.5)