Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895740_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 433370 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGTGGTCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 2016 | 0.4651914068809562 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTGGTCA | 43400 | 0.0 | 144.00299 | 2 |
TGGTCAG | 15945 | 0.0 | 143.6763 | 3 |
AGTGGTC | 43500 | 0.0 | 143.67195 | 1 |
TGGTCAT | 13800 | 0.0 | 143.48746 | 3 |
TGGTCAA | 12995 | 0.0 | 143.38663 | 3 |
GGTCATG | 6050 | 0.0 | 143.14629 | 4 |
GGTCAGT | 5250 | 0.0 | 142.84547 | 4 |
GGTCATA | 3770 | 0.0 | 142.68881 | 4 |
GGTCAGA | 4520 | 0.0 | 142.46411 | 4 |
GGTCAAT | 4085 | 0.0 | 142.10071 | 4 |
GTCAGGT | 1995 | 0.0 | 141.68884 | 5 |
GGTCAAG | 5270 | 0.0 | 141.48238 | 4 |
GGTCAGG | 6170 | 0.0 | 141.18033 | 4 |
GTCATAG | 1555 | 0.0 | 140.97292 | 5 |
GTCAGTA | 1480 | 0.0 | 140.80841 | 5 |
GTCATGA | 1610 | 0.0 | 140.63591 | 5 |
GTCAAGT | 1590 | 0.0 | 140.59084 | 5 |
GGTCATT | 3940 | 0.0 | 140.55862 | 4 |
GTCAGTG | 1920 | 0.0 | 140.46329 | 5 |
GTCATTG | 1835 | 0.0 | 140.28932 | 5 |