Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895724_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 580640 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 35 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGCAGGA | 58265 | 0.0 | 143.68593 | 1 |
GCAGGAA | 58280 | 0.0 | 143.64894 | 2 |
CAGGAAT | 21170 | 0.0 | 143.3759 | 3 |
CAGGAAG | 18245 | 0.0 | 142.61261 | 3 |
CAGGAAA | 18380 | 0.0 | 139.91766 | 3 |
AGGAATG | 6825 | 0.0 | 138.38327 | 4 |
AGGAAGT | 6975 | 0.0 | 137.9914 | 4 |
AGGAATA | 6990 | 0.0 | 137.90155 | 4 |
AGGAATT | 8060 | 0.0 | 135.24826 | 4 |
AGGAAAT | 7420 | 0.0 | 133.01924 | 4 |
GGAATAG | 2380 | 0.0 | 132.07617 | 5 |
GGAATGA | 1970 | 0.0 | 131.3842 | 5 |
GGAATGT | 2615 | 0.0 | 129.85663 | 5 |
GGAATAT | 2500 | 0.0 | 129.77393 | 5 |
GGAATTG | 2820 | 0.0 | 129.1092 | 5 |
GGAAGTG | 2315 | 0.0 | 127.68733 | 5 |
AGGAAAG | 6625 | 0.0 | 127.325356 | 4 |
GGAAGTA | 2305 | 0.0 | 127.30294 | 5 |
AGGAAGG | 6980 | 0.0 | 127.25364 | 4 |
AGGAAGA | 5635 | 0.0 | 127.17666 | 4 |