Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895716_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 935009 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 14380 | 1.5379531106117694 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 8361 | 0.8942159915038251 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 2272 | 0.24299231344297223 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 2004 | 0.2143294877375512 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 1315 | 0.14064035747249493 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 24815 | 0.0 | 100.07571 | 1 |
GGTATCA | 24825 | 0.0 | 99.90254 | 8 |
GTGGTAT | 24700 | 0.0 | 99.7624 | 6 |
GTATCAA | 25055 | 0.0 | 99.10119 | 9 |
TGGTATC | 24975 | 0.0 | 98.89614 | 7 |
AGCAGTG | 25075 | 0.0 | 98.80142 | 2 |
AGTGGTA | 25030 | 0.0 | 98.44712 | 5 |
CAGTGGT | 25090 | 0.0 | 98.27999 | 4 |
GCAGTGG | 25885 | 0.0 | 95.37358 | 3 |
CCGACGC | 60 | 4.9463374E-4 | 48.330513 | 145 |
CACGCGG | 70 | 0.0010569089 | 41.42616 | 145 |
CGGTCTG | 220 | 7.4889067E-7 | 26.3621 | 145 |
CCGCAAG | 615 | 0.0 | 24.754656 | 145 |
CGACCTA | 205 | 0.0 | 24.049438 | 45-49 |
CGATAGG | 55 | 1.9709114E-7 | 23.728428 | 35-39 |
CATGGGG | 6095 | 0.0 | 23.719015 | 25-29 |
ACATGGG | 23035 | 0.0 | 21.357819 | 20-24 |
TACATGG | 23975 | 0.0 | 21.306656 | 20-24 |
CGCAAGG | 445 | 1.1459633E-10 | 21.178543 | 145 |
ATGGGAT | 3855 | 0.0 | 21.13913 | 25-29 |