FastQCFastQC Report
Sun 19 Mar 2023
SRR4895712_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895712_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences887896
Sequences flagged as poor quality0
Sequence length151
%GC32

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGAGA889050.0144.012332
AACCGAG889350.0143.963751
CCGAGAT311450.0143.882863
CCGAGAG297350.0143.455253
CGAGAGT101450.0143.425164
CGAGATT105550.0143.38724
CGAGATG104250.0143.238664
CCGAGAA271200.0143.196663
CGAGATA100300.0142.984884
CGAGAAG92950.0142.655524
CGAGAAT94800.0142.381554
CGAGAGA90800.0142.142324
CGAGAGG104000.0141.295094
CGAGAAA85550.0138.72864
CGAGATC3100.0130.251454
CCGAGAC13600.0127.241443
CGAGACT3350.0126.988214
GAGATTG40800.0125.47425
GAGAGTA36150.0125.2586065
CGAGACG5300.0125.160764
Produced by FastQC (version 0.11.5)