FastQCFastQC Report
Sun 19 Mar 2023
SRR4895707_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895707_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1183838
Sequences flagged as poor quality0
Sequence length151
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAGCTA1185700.0143.971622
AAGCTAG443200.0143.877323
AAGCTAT381800.0143.673933
ACAAGCT1188500.0143.632431
AGCTATG165700.0143.419464
GCTATAG46000.0143.418985
AGCTAGT152600.0143.399464
AGCTAGG167350.0143.168674
AGCTAGA122250.0143.023124
AGCTAAG132450.0142.950654
AGCTATA108350.0142.472524
AAGCTAA346550.0142.455033
AGCTAAT113050.0142.289354
GCTAGTA45600.0142.147175
GCTAGGA42900.0142.01785
GCTATGA42400.0141.821995
AGCTATT107200.0141.781394
GCTAGAT41900.0141.62155
GCTAGAG43000.0141.352195
GCTAGTG55950.0141.238745
Produced by FastQC (version 0.11.5)