Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895706_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 415273 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CGCTGATCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 882 | 0.21239040342136378 | No Hit |
CGCTGATCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 420 | 0.10113828734350655 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCAATCG | 35 | 1.2732926E-11 | 144.17989 | 7 |
GCTGATC | 41570 | 0.0 | 144.02382 | 2 |
CTGATCG | 13710 | 0.0 | 143.91699 | 3 |
CGCTGAT | 41620 | 0.0 | 143.85078 | 1 |
CTGATCA | 12225 | 0.0 | 143.82608 | 3 |
TGATCGA | 3990 | 0.0 | 143.45718 | 4 |
CTGATCT | 14290 | 0.0 | 143.42319 | 3 |
TGATCAG | 4840 | 0.0 | 142.98833 | 4 |
TGATCTG | 5605 | 0.0 | 142.89372 | 4 |
GATCAGT | 1665 | 0.0 | 142.88098 | 5 |
ATCGGTA | 460 | 0.0 | 142.6127 | 6 |
GATCTGG | 2115 | 0.0 | 142.47565 | 5 |
TGATCGG | 4085 | 0.0 | 142.23868 | 4 |
TGATCGT | 5550 | 0.0 | 142.23152 | 4 |
TGATCAT | 4035 | 0.0 | 142.03595 | 4 |
TGATCAA | 3315 | 0.0 | 142.00523 | 4 |
GATCGTA | 1655 | 0.0 | 141.56638 | 5 |
GATCGAT | 1320 | 0.0 | 141.44922 | 5 |
CTGATCC | 1460 | 0.0 | 141.21729 | 3 |
GATCAAT | 1065 | 0.0 | 140.79538 | 5 |