Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895702_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1033643 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CCTAATCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 23415 | 2.265288886008032 | No Hit |
CCTAATCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC | 5849 | 0.5658626817963263 | No Hit |
CCTAATCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT | 2438 | 0.23586480051623238 | No Hit |
CCTAATCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCG | 2353 | 0.227641458414559 | No Hit |
CCTAATCCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGC | 2011 | 0.19455459960547308 | No Hit |
CCTAATCCGTGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 1628 | 0.15750118754734468 | No Hit |
CCTAATCCTATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC | 1410 | 0.1364107336865823 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCTAATC | 103550 | 0.0 | 143.97272 | 1 |
CTAATCC | 103580 | 0.0 | 143.93102 | 2 |
TAATCCG | 34620 | 0.0 | 143.88324 | 3 |
AATCCGA | 9415 | 0.0 | 142.78197 | 4 |
AATCCGT | 12855 | 0.0 | 142.77872 | 4 |
TAATCCA | 32905 | 0.0 | 142.65935 | 3 |
ATCCATG | 9145 | 0.0 | 142.50243 | 5 |
AATCCTG | 11595 | 0.0 | 142.37143 | 4 |
TAATCCT | 32605 | 0.0 | 142.35727 | 3 |
ATCCGTA | 3635 | 0.0 | 142.25337 | 5 |
ATCCGAT | 3200 | 0.0 | 141.53291 | 5 |
AATCCAG | 9855 | 0.0 | 141.38336 | 4 |
AATCCGG | 12250 | 0.0 | 141.17601 | 4 |
AATCCAT | 15380 | 0.0 | 141.14256 | 4 |
ATCCGTG | 4630 | 0.0 | 140.96634 | 5 |
ATCCGAG | 3450 | 0.0 | 140.6837 | 5 |
ATCCAGT | 3385 | 0.0 | 140.61546 | 5 |
ATCCTAG | 3320 | 0.0 | 140.54456 | 5 |
ATCCGGA | 3110 | 0.0 | 140.52708 | 5 |
ATCCGGT | 4155 | 0.0 | 140.07167 | 5 |