Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895700_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 417921 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CCATCCTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 18637 | 4.4594552558976455 | No Hit |
CCATCCTCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 8777 | 2.1001576853041604 | No Hit |
CCATCCTCTGTGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 3323 | 0.7951263516310499 | No Hit |
CCATCCTCTGCGTTGATACCACTGCTTCCCAGGTACTCTGCGTTGATACC | 1775 | 0.4247214186413222 | No Hit |
CCATCCTCTGCGTTGATACCACTGCTTCCCATGTACGCTGCGTTGATACC | 1182 | 0.28282857286424945 | No Hit |
CCATCCTCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCG | 1025 | 0.24526166428583393 | No Hit |
CCATCCTCTGGGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 862 | 0.20625907767257448 | No Hit |
CCATCCTCTGCGTTGATACCACTGCTTCCCATGCACTCTGCGTTGATACC | 820 | 0.19620933142866717 | No Hit |
CCATCCTCTGAGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 698 | 0.16701721138684106 | No Hit |
CCATCCTCTGCGTTGATACCACGGCTTCCCATGTACTCTGCGTTGATACC | 651 | 0.1557710667805638 | No Hit |
CCATCCTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCA | 518 | 0.12394687034152387 | No Hit |
CCATCCTCTGCGTTGATACCACTGCTTCGCATGTACTCTGCGTTGATACC | 516 | 0.1234683109965759 | No Hit |
CCATCCTCGTGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 496 | 0.11868271754709624 | No Hit |
CCATCCTCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACT | 477 | 0.11413640377009053 | No Hit |
CCATCCTCATGTACTCTGCGTTGATACCACTGCTCCCCATGTACTCTGCG | 475 | 0.11365784442514254 | No Hit |
CCATCCTCTGCGTTCATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 465 | 0.11126504770040271 | No Hit |
CCATCCTCATGTACTCTGCGTGGATACCACTGCTTCCCATGTACTCTGCG | 446 | 0.10671873392339702 | No Hit |
CCATCCTCTGCGTTGATACCACTGCTTCCCATGGACTCTGCGTTGATACC | 434 | 0.1038473778537092 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGATAGT | 55 | 0.0 | 144.24731 | 8 |
CGATTAG | 50 | 0.0 | 144.2473 | 8 |
ATCCTCG | 12470 | 0.0 | 143.7846 | 3 |
CCATCCT | 41985 | 0.0 | 143.57735 | 1 |
CATCCTC | 41995 | 0.0 | 143.54315 | 2 |
ATCCTCA | 12290 | 0.0 | 143.191 | 3 |
ATCCTCT | 16170 | 0.0 | 142.81999 | 3 |
TCCTCGA | 3475 | 0.0 | 142.5869 | 4 |
CCTCATG | 3495 | 0.0 | 142.39005 | 5 |
CTCGATA | 330 | 0.0 | 142.06175 | 6 |
CCTCGAT | 1055 | 0.0 | 140.82913 | 5 |
TCCTCAG | 3350 | 0.0 | 140.15671 | 4 |
TCCTCAT | 6055 | 0.0 | 139.95918 | 4 |
CTCATGT | 2805 | 0.0 | 139.61905 | 6 |
CTCATAG | 310 | 0.0 | 139.59416 | 6 |
TCCTCTG | 9315 | 0.0 | 138.98225 | 4 |
TCCTCGT | 4625 | 0.0 | 138.32149 | 4 |
CTCGATG | 345 | 0.0 | 137.9757 | 6 |
CCTCGTA | 1420 | 0.0 | 137.64444 | 5 |
CCTCAGG | 1165 | 0.0 | 137.43735 | 5 |