Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895697_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 411717 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATTGGCTCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 3501 | 0.8503413752650485 | No Hit |
ATTGGCTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 3325 | 0.8075935654830866 | No Hit |
ATTGGCTCTGCGTTGATACCACTGCTTCCCATGTACGCTGCGTTGATACC | 613 | 0.1488886783883104 | No Hit |
ATTGGCTCTGTGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 571 | 0.13868749650852408 | No Hit |
ATTGGCTCATGTACTCTGCGGTGATACCACTGCTTCCCATGTACTCTGCG | 565 | 0.13723018481141172 | No Hit |
ATTGGCTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCA | 447 | 0.1085697214348691 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ATTGGCT | 41285 | 0.0 | 143.81519 | 1 |
TGGCTCA | 12015 | 0.0 | 143.49672 | 3 |
TGGCTCG | 13325 | 0.0 | 143.29695 | 3 |
TTGGCTC | 41435 | 0.0 | 143.29456 | 2 |
GCTCGAT | 1235 | 0.0 | 142.46529 | 5 |
GGCTCGA | 3785 | 0.0 | 142.12128 | 4 |
TGGCTCT | 14545 | 0.0 | 142.03555 | 3 |
GGCTCAT | 5150 | 0.0 | 141.83662 | 4 |
GGCTCGT | 5125 | 0.0 | 141.82503 | 4 |
GCTCGTA | 1435 | 0.0 | 141.70442 | 5 |
GCTCATG | 2510 | 0.0 | 141.63135 | 5 |
GCTCAGT | 1175 | 0.0 | 141.14845 | 5 |
GGCTCAA | 3270 | 0.0 | 140.90918 | 4 |
GGCTCTG | 5640 | 0.0 | 140.5092 | 4 |
GGCTCAG | 3660 | 0.0 | 140.07953 | 4 |
GCTCGAG | 1335 | 0.0 | 139.8958 | 5 |
GCTCTTA | 1460 | 0.0 | 139.77185 | 5 |
GGCTCTA | 4145 | 0.0 | 139.69382 | 4 |
GCTCAGG | 1295 | 0.0 | 139.2055 | 5 |
CTCGTGA | 570 | 0.0 | 139.15666 | 6 |