FastQCFastQC Report
Sun 19 Mar 2023
SRR4895697_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895697_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences411717
Sequences flagged as poor quality0
Sequence length151
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGGCTCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG35010.8503413752650485No Hit
ATTGGCTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC33250.8075935654830866No Hit
ATTGGCTCTGCGTTGATACCACTGCTTCCCATGTACGCTGCGTTGATACC6130.1488886783883104No Hit
ATTGGCTCTGTGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC5710.13868749650852408No Hit
ATTGGCTCATGTACTCTGCGGTGATACCACTGCTTCCCATGTACTCTGCG5650.13723018481141172No Hit
ATTGGCTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCA4470.1085697214348691No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTGGCT412850.0143.815191
TGGCTCA120150.0143.496723
TGGCTCG133250.0143.296953
TTGGCTC414350.0143.294562
GCTCGAT12350.0142.465295
GGCTCGA37850.0142.121284
TGGCTCT145450.0142.035553
GGCTCAT51500.0141.836624
GGCTCGT51250.0141.825034
GCTCGTA14350.0141.704425
GCTCATG25100.0141.631355
GCTCAGT11750.0141.148455
GGCTCAA32700.0140.909184
GGCTCTG56400.0140.50924
GGCTCAG36600.0140.079534
GCTCGAG13350.0139.89585
GCTCTTA14600.0139.771855
GGCTCTA41450.0139.693824
GCTCAGG12950.0139.20555
CTCGTGA5700.0139.156666