FastQCFastQC Report
Sun 19 Mar 2023
SRR4895694_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895694_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences880390
Sequences flagged as poor quality0
Sequence length151
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCGAC880750.0144.156852
ATAGCGA880850.0144.140491
AGCGACT302150.0143.76893
AGCGACA263250.0143.427963
AGCGACG290000.0143.327183
GCGACTA90150.0143.262474
GCGACAT97450.0143.186394
GCGACTT112750.0143.071144
GCGACGT107000.0142.941884
GCGACTG96450.0142.652284
CGACTAT31650.0142.399635
CGACGTA34050.0142.316335
CGACATG33600.0141.646965
CGACTAG29750.0141.313665
CGACAGT28550.0141.191425
GCGACGA82450.0140.898854
CGACGGT32500.0140.894135
CGACTTA32000.0140.842155
CGACTGA26350.0140.664695
CGACGTT34100.0140.627375
Produced by FastQC (version 0.11.5)