FastQCFastQC Report
Sun 19 Mar 2023
SRR4895682_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895682_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences979826
Sequences flagged as poor quality0
Sequence length151
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG255062.6031152469928336No Hit
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCG35700.36435040507192096No Hit
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT31640.322914476651977No Hit
AACTCACCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC30060.3067891646067771No Hit
AACTCACCATGTACTCTGCGTTGATACCACTGCTCCCCATGTACTCTGCG15770.1609469436410138No Hit
AACTCACCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGC12500.1275736712436698No Hit
AACTCACCATGTACTCTGCGTGGATACCACTGCTTCCCATGTACTCTGCG11970.1221645475829382No Hit
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACGCTGCG11430.11665336498521166No Hit
AACTCACCATGTACTCTGCGGTGATACCACTGCTTCCCATGTACTCTGCG10250.10461041041980924No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACTCAC982400.0143.850311
ACTCACC982950.0143.769822
CTCACCG313900.0143.19823
CTCACCA334550.0142.744663
TCACCGT112450.0142.692874
CTCACCT303350.0142.639243
TCACCAG92000.0142.507524
TCACCTG102550.0142.122364
TCACCGA88250.0142.107384
TCACCAT161150.0141.815494
TCACCGG111600.0141.776474
TCACCTA92250.0141.574114
CACCATG96300.0141.386345
ACCATGT76700.0141.31736
CACCGAT30900.0140.497885
TCACCTT110650.0138.170764
CACCGTG36800.0138.157045
CACCGTA34050.0138.095
ACCGTAT11150.0137.117456
CACCGTT40200.0136.876925