Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895682_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 979826 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 39 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 25506 | 2.6031152469928336 | No Hit |
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCG | 3570 | 0.36435040507192096 | No Hit |
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT | 3164 | 0.322914476651977 | No Hit |
AACTCACCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC | 3006 | 0.3067891646067771 | No Hit |
AACTCACCATGTACTCTGCGTTGATACCACTGCTCCCCATGTACTCTGCG | 1577 | 0.1609469436410138 | No Hit |
AACTCACCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGC | 1250 | 0.1275736712436698 | No Hit |
AACTCACCATGTACTCTGCGTGGATACCACTGCTTCCCATGTACTCTGCG | 1197 | 0.1221645475829382 | No Hit |
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACGCTGCG | 1143 | 0.11665336498521166 | No Hit |
AACTCACCATGTACTCTGCGGTGATACCACTGCTTCCCATGTACTCTGCG | 1025 | 0.10461041041980924 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AACTCAC | 98240 | 0.0 | 143.85031 | 1 |
ACTCACC | 98295 | 0.0 | 143.76982 | 2 |
CTCACCG | 31390 | 0.0 | 143.1982 | 3 |
CTCACCA | 33455 | 0.0 | 142.74466 | 3 |
TCACCGT | 11245 | 0.0 | 142.69287 | 4 |
CTCACCT | 30335 | 0.0 | 142.63924 | 3 |
TCACCAG | 9200 | 0.0 | 142.50752 | 4 |
TCACCTG | 10255 | 0.0 | 142.12236 | 4 |
TCACCGA | 8825 | 0.0 | 142.10738 | 4 |
TCACCAT | 16115 | 0.0 | 141.81549 | 4 |
TCACCGG | 11160 | 0.0 | 141.77647 | 4 |
TCACCTA | 9225 | 0.0 | 141.57411 | 4 |
CACCATG | 9630 | 0.0 | 141.38634 | 5 |
ACCATGT | 7670 | 0.0 | 141.3173 | 6 |
CACCGAT | 3090 | 0.0 | 140.49788 | 5 |
TCACCTT | 11065 | 0.0 | 138.17076 | 4 |
CACCGTG | 3680 | 0.0 | 138.15704 | 5 |
CACCGTA | 3405 | 0.0 | 138.09 | 5 |
ACCGTAT | 1115 | 0.0 | 137.11745 | 6 |
CACCGTT | 4020 | 0.0 | 136.87692 | 5 |