FastQCFastQC Report
Sun 19 Mar 2023
SRR4895680_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895680_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1006075
Sequences flagged as poor quality0
Sequence length151
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTA1014550.0143.009662
GTGGTAG346850.0142.346863
GTGGTAT361400.0141.763763
GTGGTAA299800.0141.572173
TGGTGGT1026650.0141.324161
TGGTAGA100250.0139.182894
TGGTATG128950.0139.073294
TGGTAAG105050.0138.657884
TGGTAGT126400.0138.456074
TGGTATA106350.0138.047824
TGGTAGG124550.0137.038884
TGGTAAT107550.0136.574584
GGTAGTA38100.0133.619235
GGTATAG37800.0131.245965
GGTAATG41650.0130.886865
GGTATGA33550.0130.247485
TGGTAAA98800.0129.693954
TGGTATT138300.0129.358154
GGTATGC11950.0128.528955
GGTATTG48100.0128.47695
Produced by FastQC (version 0.11.5)