Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895674_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 321316 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 18482 | 5.751970023279264 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 2388 | 0.7431936162531589 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 1135 | 0.3532348217953665 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 1038 | 0.32304647138642334 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 957 | 0.2978376426944192 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCCG | 791 | 0.24617510488117617 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 699 | 0.2175428550087764 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCCA | 618 | 0.19233402631677227 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 553 | 0.17210471934170724 | No Hit |
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 485 | 0.1509417520447161 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT | 384 | 0.11950852120653811 | No Hit |
AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA | 339 | 0.10550361637764692 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATCTTAGTTCAACTTTAA | 332 | 0.10332507562648607 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 16880 | 0.0 | 66.34194 | 1 |
GTGGTAT | 17060 | 0.0 | 65.05889 | 6 |
GGTATCA | 17225 | 0.0 | 64.77239 | 8 |
GTATCAA | 17240 | 0.0 | 64.716034 | 9 |
AGTGGTA | 17155 | 0.0 | 64.66642 | 5 |
TGGTATC | 17190 | 0.0 | 64.56688 | 7 |
AGCAGTG | 17365 | 0.0 | 64.39546 | 2 |
CAGTGGT | 17345 | 0.0 | 64.177055 | 4 |
GCAGTGG | 17425 | 0.0 | 63.799175 | 3 |
CGTGGGA | 230 | 9.986252E-10 | 31.519741 | 145 |
AAATATA | 620 | 0.0 | 29.23202 | 145 |
GCGCTAG | 20 | 0.006072801 | 29.002676 | 70-74 |
GGTCGCG | 25 | 5.157125E-4 | 28.998165 | 50-54 |
CGCTGTT | 185 | 5.802902E-6 | 27.430695 | 145 |
TAGGTCG | 35 | 1.2567293E-4 | 24.85557 | 45-49 |
ACGTACC | 30 | 0.0014938634 | 24.168898 | 70-74 |
AGAGGTA | 180 | 1.5162045E-4 | 24.168898 | 5 |
GCCCCAA | 300 | 1.699118E-8 | 24.165136 | 145 |
AAACCGC | 245 | 0.0 | 23.67197 | 85-89 |
AGGTATC | 185 | 1.827689E-4 | 23.512024 | 7 |