FastQCFastQC Report
Sun 19 Mar 2023
SRR4895667_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895667_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences776716
Sequences flagged as poor quality0
Sequence length151
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGCGAA777650.0144.036392
TGCGAAT281400.0143.981953
GGTGCGA778350.0143.906861
TGCGAAG266800.0143.888263
GCGAATA84550.0143.189184
TGCGAAA219400.0143.1283
GCGAATG102050.0143.011384
GCGAAGT92750.0142.81324
GCGAATT93900.0142.753544
CGAAGTA27450.0142.111115
CGAATGT34150.0142.10115
GCGAAAT80050.0141.870574
CGAATAT28450.0141.171175
GCGAAAG80250.0140.977894
GCGAAGA75500.0140.678884
CGAATGA27200.0140.501225
CGAATTG32900.0140.486715
CGAAGTT30550.0140.20015
CGAAGGT34400.0140.020345
CGAATTA27200.0139.971025
Produced by FastQC (version 0.11.5)