Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895634_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 455834 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 11414 | 2.5039817126410053 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 2985 | 0.6548436492231822 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 1728 | 0.3790853687965356 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 1487 | 0.32621524502340765 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 1269 | 0.2783908177099558 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGATTCTATAGAAGAAATGCAA | 624 | 0.1368919387320823 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGAAGAAATGCAAACTATCA | 468 | 0.10266895404906172 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 17490 | 0.0 | 100.188515 | 1 |
GTATCAA | 18090 | 0.0 | 96.82543 | 9 |
GGTATCA | 18040 | 0.0 | 96.79354 | 8 |
GTGGTAT | 18045 | 0.0 | 96.60597 | 6 |
AGCAGTG | 18100 | 0.0 | 96.47267 | 2 |
AGTGGTA | 18130 | 0.0 | 96.27304 | 5 |
CAGTGGT | 18125 | 0.0 | 96.25959 | 4 |
TGGTATC | 18185 | 0.0 | 95.782486 | 7 |
GCAGTGG | 18410 | 0.0 | 94.730034 | 3 |
CGGTCTG | 45 | 0.009636402 | 48.332565 | 145 |
CGGGGGG | 105 | 0.007704722 | 27.618607 | 145 |
AGAGGTA | 110 | 0.009656582 | 26.369003 | 5 |
GAAACCG | 425 | 0.0 | 25.246658 | 85-89 |
CGCTCGT | 30 | 0.0014949967 | 24.166283 | 65-69 |
CCGCGAA | 90 | 0.0051636957 | 24.166283 | 9 |
CATGGGG | 2545 | 0.0 | 24.04284 | 25-29 |
ATGGGAG | 3025 | 0.0 | 23.583097 | 25-29 |
AAACCGC | 450 | 0.0 | 22.877413 | 85-89 |
AAATATA | 1125 | 0.0 | 22.555197 | 145 |
ATGGGAT | 2975 | 0.0 | 21.493776 | 25-29 |