FastQCFastQC Report
Sat 18 Mar 2023
SRR4895626_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895626_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences708780
Sequences flagged as poor quality0
Sequence length151
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGACGGA710350.0143.886612
GACGGAT246100.0143.859833
ACGGATA79850.0143.489014
AAGACGG712600.0143.43231
GACGGAG253350.0142.873783
ACGGAGT90050.0142.690034
GACGGAA203100.0142.613833
ACGGAAT78600.0142.560154
ACGGATT84550.0142.249954
ACGGATG82250.0142.19514
CGGATAT26400.0142.026415
CGGATGA21950.0141.583445
CGGATAG27350.0141.575035
CGGATTG30950.0141.415745
CGGAATG29150.0141.243095
CGGATTA24950.0141.032425
CGGATGT28400.0140.910835
CGGAGTT31100.0140.269965
CGGAAGT21400.0139.831185
ACGGAGA76600.0139.598924
Produced by FastQC (version 0.11.5)