FastQCFastQC Report
Sat 18 Mar 2023
SRR4895605_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895605_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1327502
Sequences flagged as poor quality0
Sequence length150
%GC23

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGCAGA1329550.0143.776922
ACAGCAG1329650.0143.766111
AGCAGAT473400.0143.588293
AGCAGAG447450.0143.274843
AGCAGAA410850.0142.9653
GCAGATT167800.0142.926254
GCAGAGT157600.0142.902514
GCAGATG161550.0142.706484
GCAGATA145700.0142.565874
GCAGAAT149400.0142.312234
CAGATAG48550.0141.774465
GCAGAGA132600.0141.772724
CAGAGTA48250.0141.760625
GCAGAAG143950.0141.598134
CAGATGA50400.0141.427545
GCAGAGG159700.0141.023394
CAGAAGT52950.0140.19165
CAGAATG48450.0139.986595
CAGATTG56650.0139.93195
CAGATAT52650.0139.486155
Produced by FastQC (version 0.11.5)