Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895604_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4046434 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 24 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CACAGAA | 405820 | 0.0 | 143.57918 | 2 |
ACACAGA | 405905 | 0.0 | 143.5491 | 1 |
ACAGAAT | 146110 | 0.0 | 143.0961 | 3 |
ACAGAAG | 138260 | 0.0 | 143.0397 | 3 |
CAGAAGT | 50240 | 0.0 | 142.37846 | 4 |
CAGAATG | 49905 | 0.0 | 142.0502 | 4 |
CAGAATA | 45865 | 0.0 | 141.4077 | 4 |
CAGAAGA | 42380 | 0.0 | 140.6001 | 4 |
CAGAAGG | 47080 | 0.0 | 140.25111 | 4 |
ACAGAAA | 125120 | 0.0 | 139.82018 | 3 |
CAGAATT | 52160 | 0.0 | 139.78783 | 4 |
CAGAAAG | 44770 | 0.0 | 139.57533 | 4 |
CAGAAAT | 46340 | 0.0 | 139.25906 | 4 |
AGAATAG | 17270 | 0.0 | 130.99054 | 5 |
AGAATGA | 16580 | 0.0 | 128.53851 | 5 |
AGAAGTA | 17480 | 0.0 | 128.38713 | 5 |
AGAATGG | 18815 | 0.0 | 128.1937 | 5 |
AGAATTG | 19885 | 0.0 | 126.36474 | 5 |
AGAAGTG | 17855 | 0.0 | 126.33585 | 5 |
CAGAAAA | 37900 | 0.0 | 125.6087 | 4 |