FastQCFastQC Report
Sat 18 Mar 2023
SRR4895602_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895602_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2069088
Sequences flagged as poor quality0
Sequence length150
%GC25

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACGGAT729300.0143.832153
AAGACGG2073450.0143.694431
AGACGGA2074750.0143.604392
GACGGAA626700.0143.597893
ACGGATA234000.0143.476934
ACGGAAT224600.0143.038284
ACGGAGA220100.0142.822364
GACGGAG718150.0142.79693
CGGATAT78450.0142.71515
ACGGATT253900.0142.667194
ACGGATG244500.0142.615954
CGGATAG81750.0142.414675
ACGGAAG200650.0142.24174
CGGAGTA77800.0141.964025
CGGAGAT78300.0141.701165
ACGGAAA205900.0141.587174
CGGAATA71850.0141.494785
ACGGAGT247150.0141.436374
CGGATGT89550.0141.346745
CGGAATG77000.0141.288315
Produced by FastQC (version 0.11.5)