Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895591_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 719212 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 3103 | 0.431444414164391 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 1653 | 0.22983487483523635 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 1516 | 0.2107862493951714 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 1339 | 0.18617598149085388 | No Hit |
GAGGAGGCTACTGGCGTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATC | 1046 | 0.145436950440204 | No Hit |
CCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCTGGTCCCA | 862 | 0.1198533951046423 | No Hit |
GTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCT | 848 | 0.1179068202421539 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 782 | 0.10873011017613722 | No Hit |
CTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCTGGTCCCAGCCAGCA | 761 | 0.10581024788240465 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT | 746 | 0.10372463195830993 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCGCAATAGATATAGTACC | 720 | 0.10010956435654576 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 14170 | 0.0 | 138.6139 | 1 |
GGTATCA | 14195 | 0.0 | 138.53413 | 8 |
GTGGTAT | 14240 | 0.0 | 137.99525 | 6 |
TGGTATC | 14300 | 0.0 | 137.51692 | 7 |
GTATCAA | 14295 | 0.0 | 137.41397 | 9 |
AGCAGTG | 14405 | 0.0 | 136.55252 | 2 |
CAGTGGT | 14475 | 0.0 | 135.85437 | 4 |
AGTGGTA | 14470 | 0.0 | 135.85156 | 5 |
GCAGTGG | 14910 | 0.0 | 131.9275 | 3 |
TCAACGC | 14150 | 0.0 | 28.273111 | 10-14 |
ATCAACG | 14140 | 0.0 | 28.23202 | 10-14 |
AGAGTAC | 14265 | 0.0 | 27.994722 | 15-19 |
TACATGG | 14235 | 0.0 | 27.986822 | 20-24 |
GTACATG | 14270 | 0.0 | 27.928267 | 20-24 |
CAACGCA | 14330 | 0.0 | 27.928017 | 10-14 |
CAGAGTA | 14370 | 0.0 | 27.800186 | 15-19 |
AGTACAT | 14360 | 0.0 | 27.753231 | 20-24 |
CGCAGAG | 14465 | 0.0 | 27.607655 | 15-19 |
GCAGAGT | 14470 | 0.0 | 27.588165 | 15-19 |
GAGTACA | 14285 | 0.0 | 27.435303 | 20-24 |