FastQCFastQC Report
Sat 18 Mar 2023
SRR4895588_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895588_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2868
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACACA2850.0144.01
ACACGTT100.006867322144.05
ACACGTA100.006867322144.05
ACACGGT151.1371939E-4144.05
ACACGGA100.006867322144.05
ACACGCT100.006867322144.05
CACACTT201.8461906E-6144.04
CACACTG252.9580406E-8144.04
CACACTA151.1371939E-4144.04
CACACGT201.8461906E-6144.04
CACACGG304.674803E-10144.04
CACACGA100.006867322144.04
CACATGA100.006867322144.06
CACACCT304.674803E-10144.04
CACACCG151.1371939E-4144.04
CACACCC357.2759576E-12144.04
CACACCA100.006867322144.04
CACACAT201.8461906E-6144.04
CACACAA252.9580406E-8144.04
ACACCTT151.1371939E-4144.05
Produced by FastQC (version 0.11.5)