Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895583_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1636713 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 8542 | 0.5218996855282508 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 7349 | 0.44900969198631646 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 6562 | 0.4009255135139759 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCGGGCGCGGTGGCTCA | 5924 | 0.36194494697604285 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGGCGCGGTGGCTCAT | 2540 | 0.15518908935164566 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCGCGGTGGCTCATGCCT | 1725 | 0.10539416501243651 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 35615 | 0.0 | 138.35579 | 1 |
GGTATCA | 35845 | 0.0 | 137.44609 | 8 |
GTGGTAT | 36055 | 0.0 | 136.68547 | 6 |
TGGTATC | 36170 | 0.0 | 136.2708 | 7 |
GTATCAA | 36160 | 0.0 | 136.20895 | 9 |
AGTGGTA | 36520 | 0.0 | 134.90567 | 5 |
CAGTGGT | 36785 | 0.0 | 134.05122 | 4 |
AGCAGTG | 36970 | 0.0 | 133.3238 | 2 |
GCAGTGG | 37740 | 0.0 | 130.56548 | 3 |
TCAACGC | 35945 | 0.0 | 28.1296 | 10-14 |
ATCAACG | 35930 | 0.0 | 28.097273 | 10-14 |
AGAGTAC | 36250 | 0.0 | 27.821955 | 15-19 |
CAGAGTA | 36335 | 0.0 | 27.76083 | 15-19 |
GTACATG | 36380 | 0.0 | 27.699575 | 20-24 |
TACATGG | 36405 | 0.0 | 27.648912 | 20-24 |
CAACGCA | 36680 | 0.0 | 27.573784 | 10-14 |
AGTACAT | 36650 | 0.0 | 27.4798 | 20-24 |
GCAGAGT | 36855 | 0.0 | 27.388672 | 15-19 |
CGCAGAG | 37075 | 0.0 | 27.241682 | 15-19 |
AACGCAG | 37380 | 0.0 | 27.065123 | 10-14 |