SRR4895582_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895582_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1963236
Sequences flagged as poor quality	0
Sequence length	150
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8219	0.4186455423596551	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	6886	0.3507474394316323	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	4853	0.24719391861192438	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT	3382	0.17226660472811217	No Hit
GAGGAGGCTACTGGCGTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATC	2764	0.14078796436088173	No Hit
GTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCT	2345	0.11944564993714459	No Hit
GGTGGTCACTGCGTGGCCCTGTGTACCCGAGGAGGCTACTGGCGTCGAGC	2296	0.11694977068472664	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGTTTCTTGCTGCAGCAACGC	2241	0.11414827356466567	No Hit
CCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCTGGTCCCA	2115	0.1077302983441624	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT	1988	0.10126138681238527	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	38595	0.0	137.72258	1
GGTATCA	38625	0.0	137.39532	8
GTGGTAT	38750	0.0	137.11928	6
GTATCAA	38805	0.0	136.7951	9
TGGTATC	38850	0.0	136.76634	7
AGTGGTA	39420	0.0	134.67918	5
CAGTGGT	39455	0.0	134.5962	4
AGCAGTG	39660	0.0	134.00612	2
GCAGTGG	40215	0.0	132.12093	3
CGTGGTA	150	1.200633E-6	33.58946	5
TCAACGC	38590	0.0	28.223948	10-14
ATCAACG	38590	0.0	28.14561	10-14
AGAGTAC	38695	0.0	28.002272	15-19
TACATGG	38750	0.0	27.903212	20-24
CAACGCA	39075	0.0	27.877316	10-14
CAGAGTA	38930	0.0	27.859121	15-19
GTACATG	39045	0.0	27.732952	20-24
GCAGAGT	39405	0.0	27.541565	15-19
CGCAGAG	39525	0.0	27.439735	15-19
GAGTACA	38650	0.0	27.349588	20-24