FastQCFastQC Report
Sat 18 Mar 2023
SRR4895564_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895564_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1104697
Sequences flagged as poor quality0
Sequence length150
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTA1108800.0143.344832
TGGTAGC206600.0143.29144
TGGTATC203800.0142.894964
TGGTAAC143350.0142.879644
GTGGTAT371250.0142.759413
GTATCCG54800.0142.701836
GGTAGCC166250.0142.628455
GTGGTAG335550.0142.554083
GTGGTAC128850.0142.487523
GTGGTAA279150.0142.38863
GGTATCC154850.0142.35025
GTAGCCT48650.0142.256716
TGGTACC96300.0142.090414
TGGTGGT1120150.0141.892381
TATCCGA12700.0141.617487
TAGCCTA12600.0141.599497
GTAGCCG54800.0141.520316
GTATCCT45800.0141.055956
GGTAACC115100.0140.570665
GTAACCG36650.0140.546376
Produced by FastQC (version 0.11.5)