FastQCFastQC Report
Sat 18 Mar 2023
SRR4895563_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895563_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1105555
Sequences flagged as poor quality0
Sequence length150
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTTCA1108300.0143.541472
TGGCTTC1110050.0143.315171
GCTTCAG336350.0143.021473
GCTTCAT351000.0142.87363
GCTTCAA281550.0142.467453
CTTCATG110400.0141.291664
GCTTCAC146850.0141.105793
CTTCAGA88350.0139.989554
CTTCAGT114850.0139.82654
CTTCAAT95200.0139.590624
CTTCAGG107100.0139.464684
CTTCAAG88900.0138.152284
CTTCATA101300.0137.435154
CTTCACG38750.0136.285814
TTCATAG33950.0134.997565
TTCATGA28700.0134.873525
TTCAGTG38100.0134.64525
CTTCATT108250.0134.39394
CTTCAGC35300.0134.318864
CTTCACT39300.0134.012364
Produced by FastQC (version 0.11.5)