Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895560_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1486328 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTTCACA | 149245 | 0.0 | 143.31592 | 2 |
TCTTCAC | 149265 | 0.0 | 143.29672 | 1 |
TTCACAG | 45050 | 0.0 | 142.91866 | 3 |
TCACAGT | 14515 | 0.0 | 142.66963 | 4 |
TTCACAT | 46825 | 0.0 | 142.46448 | 3 |
TCACATG | 14525 | 0.0 | 142.22464 | 4 |
TCACATA | 13505 | 0.0 | 141.6179 | 4 |
TCACAAT | 12860 | 0.0 | 141.27919 | 4 |
TCACAGA | 11835 | 0.0 | 140.99063 | 4 |
TCACATT | 13770 | 0.0 | 140.7214 | 4 |
TCACAAG | 12770 | 0.0 | 140.4718 | 4 |
TTCACAC | 20610 | 0.0 | 139.68454 | 3 |
TCACAGG | 14645 | 0.0 | 139.53615 | 4 |
TTCACAA | 38715 | 0.0 | 139.50414 | 3 |
TCACACG | 5400 | 0.0 | 139.37846 | 4 |
TCACAGC | 4730 | 0.0 | 138.58461 | 4 |
TCACACT | 5200 | 0.0 | 137.26698 | 4 |
CACAGTG | 4815 | 0.0 | 136.43703 | 5 |
CACATAG | 4500 | 0.0 | 136.39369 | 5 |
CACATGT | 5160 | 0.0 | 135.82103 | 5 |