FastQCFastQC Report
Sat 18 Mar 2023
SRR4895560_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895560_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1486328
Sequences flagged as poor quality0
Sequence length150
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCACA1492450.0143.315922
TCTTCAC1492650.0143.296721
TTCACAG450500.0142.918663
TCACAGT145150.0142.669634
TTCACAT468250.0142.464483
TCACATG145250.0142.224644
TCACATA135050.0141.61794
TCACAAT128600.0141.279194
TCACAGA118350.0140.990634
TCACATT137700.0140.72144
TCACAAG127700.0140.47184
TTCACAC206100.0139.684543
TCACAGG146450.0139.536154
TTCACAA387150.0139.504143
TCACACG54000.0139.378464
TCACAGC47300.0138.584614
TCACACT52000.0137.266984
CACAGTG48150.0136.437035
CACATAG45000.0136.393695
CACATGT51600.0135.821035
Produced by FastQC (version 0.11.5)