SRR4895559_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895559_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1559683
Sequences flagged as poor quality	0
Sequence length	150
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6186	0.3966190565646993	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	5179	0.33205465469585804	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	3876	0.24851203738195515	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT	2846	0.18247297688055844	No Hit
GAGGAGGCTACTGGCGTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATC	2228	0.14284954057972038	No Hit
CCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCTGGTCCCA	1810	0.11604922282284286	No Hit
GTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCT	1785	0.11444633300484777	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC	1718	0.110150588292621	No Hit
GGTGGTCACTGCGTGGCCCTGTGTACCCGAGGAGGCTACTGGCGTCGAGC	1679	0.10765008017654869	No Hit

Adapter graph

$Kmer graph$

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	35140	139.14357	1
GTGGTAT	35390	138.13928	6
GGTATCA	35500	137.8126	8
TGGTATC	35640	137.25107	7
GTATCAA	35720	136.8631	9
AGTGGTA	35770	136.63155	5
CAGTGGT	35960	136.08975	4
AGCAGTG	35950	136.04854	2
GCAGTGG	36620	133.61836	3
ATCAACG	35445	28.056042	10-14
TCAACGC	35515	28.045322	10-14
AGAGTAC	35610	27.954872	15-19
CAGAGTA	35695	27.872175	15-19
CAACGCA	35860	27.811632	10-14
TACATGG	35770	27.787779	20-24
GTACATG	35925	27.643843	20-24
GCAGAGT	35970	27.611067	15-19
AGTACAT	36025	27.555117	20-24
CGCAGAG	36200	27.435637	15-19
AACGCAG	36355	27.428995	10-14