SRR4895557_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895557_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3937979
Sequences flagged as poor quality	0
Sequence length	150
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	20198	0.512902684346463	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	13763	0.34949399171503964	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	9853	0.2502044830609813	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGATAAACTTCGCCTTAATTTT	6840	0.17369315580403044	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT	6201	0.15746655835391707	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC	5079	0.1289747863053612	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGCGGGGAGGTAGTGACGAAAA	4590	0.11655724928954674	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAG	4011	0.10185427601315294	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	99700	139.15205	1
GGTATCA	100415	138.25209	8
GTGGTAT	100710	137.76137	6
TGGTATC	100880	137.6077	7
GTATCAA	101175	137.2705	9
AGTGGTA	101425	136.76894	5
CAGTGGT	102045	135.98732	4
AGCAGTG	102510	135.2744	2
GCAGTGG	103635	133.84068	3
TCAACGC	100415	28.256783	10-14
ATCAACG	100245	28.2286	10-14
AGAGTAC	101255	27.960667	15-19
CAACGCA	101625	27.940172	10-14
CAGAGTA	101645	27.85905	15-19
GTACATG	101630	27.816269	20-24
TACATGG	101615	27.792036	20-24
AGTACAT	101920	27.687677	20-24
GCAGAGT	102620	27.583141	15-19
CGCAGAG	102530	27.569445	15-19
AACGCAG	103085	27.52909	10-14