FastQCFastQC Report
Sat 18 Mar 2023
SRR4895555_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895555_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2330760
Sequences flagged as poor quality0
Sequence length150
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTTCTA2338500.0143.43042
GTTCTAG667150.0143.033723
GTTCTAT790750.0142.65163
GTGTTCT2355950.0142.368041
GTTCTAA584400.0142.343663
GTTCTAC309700.0142.07193
TTCTATG258300.0140.00744
TTCTAGA176100.0139.739654
TCTAGTA62150.0139.16065
TCTAGAG55850.0139.011645
TTCTAGG213250.0138.812364
TTCTACG81650.0138.707984
TTCTAGT230200.0138.531114
TCTAGAT64150.0137.738275
TCTATAG71400.0137.558475
TCTAGGT75250.0136.640245
TCTAATG71150.0136.6265
TCTATGA68550.0136.559775
TTCTATA222100.0136.358844
TCTATGG86050.0136.298055
Produced by FastQC (version 0.11.5)