SRR4895553_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895553_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2002582
Sequences flagged as poor quality	0
Sequence length	150
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	14015	0.6998464981708614	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	8787	0.4387835304621734	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	5000	0.24967766613302228	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCGGGCGCGGTGGCTCA	4088	0.20413645983035902	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGGCGCGGTGGCTCAC	2715	0.13557497271023108	No Hit
GAGGAGGCTACTGGCGTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATC	2714	0.13552503717700448	No Hit
GTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCT	2117	0.10571352384072163	No Hit
GGTGGTCACTGCGTGGCCCTGTGTACCCGAGGAGGCTACTGGCGTCGAGC	2106	0.10516423297522896	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA	2067	0.10321674717939142	No Hit
CCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCTGGTCCCA	2039	0.10181855224904647	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	25550	137.2011	8
GTGGTAT	25620	136.66103	6
GTATCAA	25900	135.70839	9
TGGTATC	25875	135.42552	7
AAGCAGT	26045	134.96298	1
CAGTGGT	26360	132.85188	4
AGTGGTA	26650	131.43323	5
AGCAGTG	26680	131.34598	2
GCAGTGG	27445	127.63237	3
ATCAACG	25615	28.073261	10-14
TCAACGC	25730	27.986963	10-14
AGAGTAC	25685	27.946438	15-19
CAGAGTA	25735	27.869762	15-19
CAACGCA	25900	27.864418	10-14
TACATGG	25705	27.6121	20-24
GTACATG	25855	27.563293	20-24
CGCAGAG	26220	27.381704	15-19
AGTACAT	26175	27.352854	20-24
GAGTACA	25755	27.155935	20-24
GCAGAGT	26415	27.114151	15-19