SRR4895550_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895550_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1567655
Sequences flagged as poor quality	0
Sequence length	150
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	12342	0.7872905709483272	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGGCGCAGTGGCTCA	4165	0.2656834571382096	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	3417	0.21796887708073523	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	3202	0.20425412479148794	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCAGGCGTGGTGGCTCAT	3099	0.19768380160175547	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGGCGCAGTGGCTCAT	2493	0.15902733700973748	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT	2007	0.1280256178814854	No Hit
GAGGAGGCTACTGGCGTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATC	1989	0.1268774060619205	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA	1926	0.1228586646934434	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGTTTCTTGCTGCAGCAACGC	1794	0.11443844468330086	No Hit
CCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCTGGTCCCA	1571	0.10021337602980247	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	22080	137.50581	8
GTGGTAT	22210	136.79822	6
AAGCAGT	22335	136.35931	1
TGGTATC	22290	136.21033	7
GTATCAA	22350	136.10237	9
AGTGGTA	22715	133.8203	5
CAGTGGT	22790	133.37991	4
AGCAGTG	23050	131.97333	2
GCAGTGG	24730	122.86232	3
ATCAACG	22105	28.108444	10-14
AGAGTAC	22125	27.953585	15-19
TCAACGC	22275	27.932709	10-14
TACATGG	22060	27.82813	20-24
CAGAGTA	22270	27.784512	15-19
CAACGCA	22420	27.771326	10-14
GTACATG	22190	27.768936	20-24
AGTACAT	22525	27.464628	20-24
CGCAGAG	22570	27.45986	15-19
GAGTACA	22200	27.243979	20-24
GCAGAGT	22820	27.114859	15-19