Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895535_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1428328 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 9786 | 0.6851367473017402 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 5075 | 0.3553105449168538 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 4379 | 0.306582241613971 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 2171 | 0.15199590010137728 | No Hit |
GAGGAGGCTACTGGCGTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATC | 1838 | 0.12868192740042905 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCAGGCGCGGTGGCTCA | 1732 | 0.121260662816944 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 1678 | 0.11748001859516863 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCGGGCGTGGTGGCTCA | 1654 | 0.11579973227437955 | No Hit |
GTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCT | 1484 | 0.10389770416879035 | No Hit |
CCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCTGGTCCCA | 1468 | 0.10277751328826432 | No Hit |
GGTGGTCACTGCGTGGCCCTGTGTACCCGAGGAGGCTACTGGCGTCGAGC | 1453 | 0.10172733433777116 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 18915 | 0.0 | 137.94487 | 8 |
AAGCAGT | 19150 | 0.0 | 136.55286 | 1 |
GTGGTAT | 19130 | 0.0 | 136.20634 | 6 |
GTATCAA | 19260 | 0.0 | 136.03464 | 9 |
TGGTATC | 19360 | 0.0 | 134.84851 | 7 |
AGCAGTG | 19615 | 0.0 | 132.87523 | 2 |
AGTGGTA | 19690 | 0.0 | 132.3691 | 5 |
CAGTGGT | 19720 | 0.0 | 132.24074 | 4 |
GCAGTGG | 20135 | 0.0 | 129.40787 | 3 |
CGTCAAT | 95 | 0.004891212 | 30.31518 | 3 |
ATCAACG | 18930 | 0.0 | 28.107199 | 10-14 |
AGAGTAC | 18920 | 0.0 | 27.962421 | 15-19 |
CAGAGTA | 18965 | 0.0 | 27.903666 | 15-19 |
TCAACGC | 19155 | 0.0 | 27.852219 | 10-14 |
TACATGG | 18910 | 0.0 | 27.802843 | 20-24 |
CAACGCA | 19255 | 0.0 | 27.759918 | 10-14 |
GTACATG | 18965 | 0.0 | 27.691843 | 20-24 |
AGTACAT | 19190 | 0.0 | 27.472216 | 20-24 |
GAGTACA | 18945 | 0.0 | 27.371428 | 20-24 |
GCAGAGT | 19320 | 0.0 | 27.301506 | 15-19 |