SRR4895533_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895533_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3774381
Sequences flagged as poor quality	0
Sequence length	150
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	26823	0.710659575702612	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	9742	0.2581085481301437	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	9471	0.25092856285573717	No Hit
GAGGAGGCTACTGGCGTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATC	5895	0.1561845505262982	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGGCGCGGTGGCTCAC	4792	0.1269612156271452	No Hit
GTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCT	4713	0.12486815718921856	No Hit
CCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCTGGTCCCA	4630	0.12266912110886527	No Hit
GGTGGTCACTGCGTGGCCCTGTGTACCCGAGGAGGCTACTGGCGTCGAGC	4485	0.11882743157089866	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCACGGTGGCTCACG	4446	0.11779414955723866	No Hit
CTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCTGGTCCCAGCCAGCA	3918	0.10380510075691882	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	58630	137.65732	8
GTGGTAT	58730	137.521	6
AAGCAGT	58905	137.44972	1
TGGTATC	59015	136.72267	7
GTATCAA	59650	135.60516	9
AGTGGTA	60035	134.55566	5
AGCAGTG	60275	133.99115	2
CAGTGGT	60535	133.51562	4
GCAGTGG	61515	131.2434	3
ATCAACG	58515	28.151556	10-14
TCAACGC	58640	28.148024	10-14
AGAGTAC	58915	27.992495	15-19
CAGAGTA	59135	27.881048	15-19
TACATGG	58595	27.868782	20-24
GTACATG	58755	27.822298	20-24
CAACGCA	59855	27.69693	10-14
AGTACAT	59580	27.56031	20-24
GCAGAGT	59925	27.419775	15-19
GAGTACA	58750	27.378569	20-24
CGCAGAG	60325	27.314342	15-19