SRR4895524_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895524_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2540025
Sequences flagged as poor quality	0
Sequence length	150
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	12955	0.5100343500556097	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	11617	0.4573577031722129	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	7503	0.29539079339770274	No Hit
GAGGAGGCTACTGGCGTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATC	4096	0.16125825533213256	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTGCCCCTCATTTACATAAAT	3415	0.1344474955955158	No Hit
GTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCT	3220	0.12677040580309248	No Hit
GGTGGTCACTGCGTGGCCCTGTGTACCCGAGGAGGCTACTGGCGTCGAGC	3205	0.12617986043444454	No Hit
CCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCTGGTCCCA	3181	0.12523498784460782	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	38675	138.05194	8
GTGGTAT	38835	137.55731	6
AAGCAGT	39125	137.12927	1
TGGTATC	38970	136.98842	7
GTATCAA	39295	136.36842	9
AGCAGTG	39695	134.68858	2
AGTGGTA	39870	134.11281	5
CAGTGGT	39885	134.00822	4
GCAGTGG	40855	130.82912	3
TCAACGC	38925	28.102827	10-14
ATCAACG	38920	28.028748	10-14
AGAGTAC	39115	27.97055	15-19
GTACATG	38930	27.874693	20-24
TACATGG	38915	27.859537	20-24
CAGAGTA	39345	27.821684	15-19
CAACGCA	39490	27.806492	10-14
AGTACAT	39510	27.534746	20-24
GCAGAGT	39690	27.489147	15-19
CGCAGAG	40020	27.26967	15-19
GAGTACA	39165	27.251532	20-24