Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895515_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2880971 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 18845 | 0.6541197394906093 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 15151 | 0.5258990805530497 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 12976 | 0.4504037006967443 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGGCGCGGTGGCTCAC | 4223 | 0.14658252373939204 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG | 3601 | 0.12499258062646239 | No Hit |
GAGGAGGCTACTGGCGTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATC | 3403 | 0.11811989777057805 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 3234 | 0.11225381997944445 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGTTTCTTGCTGCAGCAACGC | 3122 | 0.10836624179833812 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 40905 | 0.0 | 137.8549 | 8 |
AAGCAGT | 41335 | 0.0 | 136.75891 | 1 |
GTGGTAT | 41360 | 0.0 | 136.40799 | 6 |
TGGTATC | 41535 | 0.0 | 135.74661 | 7 |
GTATCAA | 41715 | 0.0 | 135.43701 | 9 |
CAGTGGT | 42515 | 0.0 | 132.68529 | 4 |
AGTGGTA | 43010 | 0.0 | 131.24191 | 5 |
AGCAGTG | 43005 | 0.0 | 131.16354 | 2 |
GCAGTGG | 43850 | 0.0 | 128.61958 | 3 |
ATCAACG | 40975 | 0.0 | 28.082653 | 10-14 |
TCAACGC | 41080 | 0.0 | 28.052935 | 10-14 |
AGAGTAC | 41070 | 0.0 | 28.042234 | 15-19 |
CAGAGTA | 41295 | 0.0 | 27.889442 | 15-19 |
TACATGG | 41240 | 0.0 | 27.755548 | 20-24 |
GTACATG | 41315 | 0.0 | 27.733044 | 20-24 |
CAACGCA | 41770 | 0.0 | 27.72053 | 10-14 |
AGTACAT | 41770 | 0.0 | 27.52058 | 20-24 |
GAGTACA | 41065 | 0.0 | 27.407452 | 20-24 |
CGCAGAG | 42290 | 0.0 | 27.192404 | 15-19 |
GCAGAGT | 42310 | 0.0 | 27.131903 | 15-19 |