Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895509_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1790144 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCGGTA | 179155 | 0.0 | 143.81432 | 2 |
GCTCGGT | 179260 | 0.0 | 143.73009 | 1 |
TCGGTAA | 49090 | 0.0 | 143.43239 | 3 |
TCGGTAG | 53985 | 0.0 | 143.42426 | 3 |
TCGGTAT | 58855 | 0.0 | 143.35612 | 3 |
CGGTATG | 18865 | 0.0 | 142.6338 | 4 |
TCGGTAC | 17845 | 0.0 | 142.55966 | 3 |
CGGTAAG | 15640 | 0.0 | 142.55042 | 4 |
CGGTAGT | 17705 | 0.0 | 142.46753 | 4 |
CGGTAAT | 16755 | 0.0 | 142.29865 | 4 |
CGGTAGA | 14915 | 0.0 | 142.24205 | 4 |
CGGTATA | 17350 | 0.0 | 142.23018 | 4 |
CGGTAGG | 18095 | 0.0 | 141.66386 | 4 |
CGGTATT | 18815 | 0.0 | 140.90915 | 4 |
CGGTACG | 4910 | 0.0 | 140.12001 | 4 |
CGGTATC | 4510 | 0.0 | 139.14377 | 4 |
CGGTACT | 4590 | 0.0 | 139.0704 | 4 |
CGGTAGC | 3860 | 0.0 | 138.71051 | 4 |
CGGTAAA | 13965 | 0.0 | 138.51988 | 4 |
CGGTACC | 4700 | 0.0 | 137.95923 | 4 |