Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895508_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2996 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CGACACACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC | 3 | 0.10013351134846463 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CACACGG | 25 | 2.986053E-8 | 144.00002 | 4 |
CACACAT | 25 | 2.986053E-8 | 144.00002 | 4 |
ACACTGT | 25 | 2.986053E-8 | 144.00002 | 5 |
CGACACA | 295 | 0.0 | 144.0 | 1 |
ACTGTGT | 10 | 0.006879821 | 144.0 | 7 |
ACACGGG | 10 | 0.006879821 | 144.0 | 5 |
ACACGCG | 10 | 0.006879821 | 144.0 | 5 |
ACACGAG | 10 | 0.006879821 | 144.0 | 5 |
CACACTG | 35 | 7.2759576E-12 | 144.0 | 4 |
CACACTA | 10 | 0.006879821 | 144.0 | 4 |
ACAGATG | 10 | 0.006879821 | 144.0 | 7 |
CACACGC | 15 | 1.1413853E-4 | 144.0 | 4 |
CACACGA | 20 | 1.857683E-6 | 144.0 | 4 |
CACACCG | 30 | 4.7475623E-10 | 144.0 | 4 |
CACACAG | 30 | 4.7475623E-10 | 144.0 | 4 |
CACACAC | 20 | 1.857683E-6 | 144.0 | 4 |
CACACAA | 10 | 0.006879821 | 144.0 | 4 |
ACAGAGT | 10 | 0.006879821 | 144.0 | 7 |
CACCGTT | 10 | 0.006879821 | 144.0 | 6 |
CACCGGT | 10 | 0.006879821 | 144.0 | 6 |