Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895507_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2742308 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 39 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CCTCTATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC | 2814 | 0.10261429423682533 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCTATC | 274775 | 0.0 | 143.60881 | 2 |
CCTCTAT | 275030 | 0.0 | 143.47566 | 1 |
TCTATCG | 87140 | 0.0 | 143.0603 | 3 |
CTATCGA | 22705 | 0.0 | 142.81682 | 4 |
TCTATCA | 71160 | 0.0 | 142.61017 | 3 |
CTATCGG | 28650 | 0.0 | 142.4377 | 4 |
CTATCGT | 29655 | 0.0 | 142.39001 | 4 |
CTATCAG | 23045 | 0.0 | 142.30197 | 4 |
CTATCTA | 21095 | 0.0 | 142.1548 | 4 |
TCTATCT | 82750 | 0.0 | 141.7206 | 3 |
CTATCAT | 24490 | 0.0 | 141.72023 | 4 |
CTATCTG | 28390 | 0.0 | 141.71477 | 4 |
TCTATCC | 36220 | 0.0 | 141.3119 | 3 |
CTATCCG | 9615 | 0.0 | 140.45213 | 4 |
TATCTAG | 7260 | 0.0 | 139.93019 | 5 |
TATCGAT | 8735 | 0.0 | 139.69353 | 5 |
CTATCAA | 19535 | 0.0 | 139.58511 | 4 |
TATCGAG | 7215 | 0.0 | 139.50659 | 5 |
TATCGGA | 7500 | 0.0 | 139.0018 | 5 |
TATCGTA | 8540 | 0.0 | 138.92363 | 5 |