SRR4895498_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895498_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2601623
Sequences flagged as poor quality	0
Sequence length	150
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	21088	0.8105709397556832	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	4376	0.16820269500999954	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG	3633	0.13964359939929805	No Hit
CCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCTGGTCCCA	3529	0.1356460947646911	No Hit
GAGGAGGCTACTGGCGTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATC	3376	0.1297651504464713	No Hit
GTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCT	2929	0.1125835680265742	No Hit
CTCAGAAGACTTCCTTTCATCTGTTCCTACTGAGCTGGTCCCAGCCAGCA	2858	0.10985450236256368	No Hit
AGAAGACTTCCTTTCATCTGTTCCTACTGAGCTGGTCCCAGCCAGCAGTT	2704	0.10393512049978032	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGATAAACTTCGCCTTAATTTT	2686	0.10324324469763682	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	2660	0.10224386853898508	No Hit
GGTGGTCACTGCGTGGCCCTGTGTACCCGAGGAGGCTACTGGCGTCGAGC	2610	0.10032199131080868	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	39300	137.37451	1
GGTATCA	39390	136.98686	8
GTGGTAT	39455	136.88889	6
TGGTATC	39635	136.28537	7
GTATCAA	39685	135.96857	9
AGTGGTA	40115	134.6367	5
CAGTGGT	40290	134.1055	4
AGCAGTG	40700	132.6668	2
GCAGTGG	41810	129.23077	3
TCAACGC	39195	28.26086	10-14
ATCAACG	39185	28.179907	10-14
AGAGTAC	39380	28.008112	15-19
TACATGG	39400	27.925549	20-24
CAGAGTA	39610	27.856384	15-19
GTACATG	39580	27.84584	20-24
CAACGCA	40050	27.664726	10-14
AGTACAT	39860	27.59244	20-24
GCAGAGT	40285	27.41822	15-19
CGCAGAG	40495	27.23693	15-19
GAGTACA	39420	27.228388	20-24